Index

Symbols

2D 3D gaussian

3D 2D

A

AbsImageFilter absolute AbsoluteValueDifferenceImageFilter access write, [1], [2], [3], [4], [5] AccumulateImageFilter AdaptiveHistogramEqualizationImageFilter AddFaceTriangle QuadEdgeMesh AddImageFilter, [1] AddPixelAccessor AddPoint QuadEdgeMesh affine AffineTransform, [1], [2], [3]

AmoebaOptimizer AND AndImageFilter AntiAliasBinaryImageFilter append, [1] ApproximateSignedDistanceMapImageFilter area volume array convert image AtanImageFilter azimuth-elevation cartesian AzimuthElevationToCartesianTransform

B

BackwardDifferenceOperator bilateral filter BilateralImageFilter binary image, [1], [2], [3], [4], [5], [6] label, [1] not property regions BinaryBallStructuringElement, [1], [2] SetRadius, [1] BinaryContourImageFilter, [1] BinaryDilateImageFilter BinaryErodeImageFilter BinaryFillholeImageFilter BinaryFunctorImageFilter, [1] BinaryImageToLabelMapFilter BinaryImageToLevelSetImageAdaptor, [1], [2], [3], [4], [5], [6] BinaryImageToShapeLabelMapFilter

BinaryMask3DMeshSource BinaryMinMaxCurvatureFlowImageFilter BinaryMorphologicalClosingImageFilter BinaryMorphologicalOpeningImageFilter BinaryNotImageFilter BinaryPruningImageFilter BinaryStatisticsOpeningImageFilter BinaryThinningImageFilter BinaryThresholdImageFilter, [1] BinomialBlurImageFilter blob, [1] BlobSpatialObject BlockMatchingImageFilter boundary color BoundingBox BresenhamLine BSplineDeformableTransform BSplineInterpolateImageFunction BSplineScatteredDataPointSetToImageFilter

C

CannyEdgeDetectionImageFilter cartesian azimuth-elevation cast VectorImage CastFrom QuadEdgeMeshPoint CastImageFilter ChangeInformationImageFilter channel extract CheckerBoardImageFilter clamp range ClampImageFilter CleanQuadEdgeMeshFilter clone Transform, [1] color boundary labeled regions colormap jet Command complex ComplexToImaginaryImageFilter ComplexToModulusImageFilter, [1] ComplexToRealImageFilter ComposeImageFilter, [1], [2], [3] concatenate, [1] ConceptChecking, [1] IsFloatingPoint ConfidenceConnectedImageFilter connect regions ConnectedComponentImageFilter, [1] ConnectedImageNeighborhoodShape ConnectedThresholdImageFilter constant pixel, [1]

ConstantBoundaryCondition ConstantPadImageFilter ConstNeighborhoodIterator contour ContourExtractor2DImageFilter ContourMeanDistanceImageFilter ContourSpatialObject convert array type ConvertPixelBuffer convolution ConvolutionImageFilter copy deep Transform, [1] correlation masked corresponding pixels, [1] CosImageFilter CovariantVector, [1], [2] GetNorm GetSquaredNorm Normalize operator * Crop ImageRegion crop region, [1] CropImageFilter curvature flow, [1], [2], [3], [4] CurvatureAnisotropicDiffusionImageFilter, [1] CurvatureFlowImageFilter, [1], [2] curve piece-wise custom operation CustomColormapFunction

D

danielsson distance-map, [1] data structure deep copy DelaunayConformingQuadEdgeMeshFilter derivative gaussian higher image kernel DerivativeImageFilter, [1], [2], [3] DerivativeOperator DICOM resample

difference kernel dilation mathematical morphology, [1] DiscreteGaussianImageFilter DiscreteGaussianImageFilter, Command distance-map danielsson, [1] DivideImageFilter division image DomainThreader duplication without

E

EdgePotentialImageFilter edges points preserve elements structuring ellipse EllipseSpatialObject erosion mathematical morphology, [1]

EuclideanDistanceTo Indices Point, [1], [2] ExceptionObject ExhaustiveOptimizer ExpectationMaximizationMixtureModelEstimator, [1], [2] ExpNegativeImageFilter extract channel ExtractImageFilter, [1]

F

factory transform Fast Fourier Transform, [1] FastMarchingImageFilter FastMarchingImageFilterBase FastMarchingImageToNodePairContainerAdaptor FastMarchingQuadEdgeMeshFilterBase FastMarchingThresholdStoppingCriterion FFT, [1] FFTNormalizedCorrelationImageFilter FFTShiftImageFilter, [1] file transform warning FileOutputWindow

filter bilateral gaussian region FixedArray FlatStructuringElement, [1], [2], [3] flip FlipImageFilter FloodFilledImageFunctionConditionalIterator flow curvature, [1], [2], [3], [4] ForwardDifferenceOperator ForwardFFTImageFilter, [1], [2] function image object

G

gaussian 2D derivative filter GaussianDerivativeOperator GaussianDistribution GaussianOperator GDCMImageIO, [1] GDCMSeriesFileNames GDCMSeriesFileNames GDCMImageIO GeodesicActiveContourLevelSetImageFilter geometric property region GetEdgeRingEntry QuadEdgeMeshPolygonCell GetLnext QuadEdge GetNorm CovariantVector

GetOnext QuadEdge GetPoint Mesh, [1], [2] GetPoints PointSet GetSquaredNorm CovariantVector GradientAnisotropicDiffusionImageFilter, [1] GradientDescentOptimizer GradientDescentOptimizerv4 GradientImageFilter, [1] GradientMagnitudeImageFilter, gradient GradientMagnitudeRecursiveGaussianImageFilter GradientMagnitudeRecursiveGaussianImageFilter, Gaussian, gradient GradientRecursiveGaussianImageFilter, [1], [2] grayscale image, [1] GrayscaleDilateImageFilter GrayscaleErodeImageFilter

H

Hessian3DToVesselnessMeasureImageFilter higher derivative

Histogram, [1]

I

IdentityTransform Image, [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] SetPixel SetRequestedRegion image array binary, [1], [2], [3], [4], [5] derivative division function grayscale, [1] kernel line magnitude mask median pad prune random, [1] region scalar segmented signed smooth vector, [1], [2], [3] Image, hello world ImageAdaptor ImageBufferRange ImageDuplicator ImageFileReader, [1], [2] ImageFileReader, ImageFileWriter ImageFileWriter, [1], [2], [3] ImageIOBase ImageKmeansModelEstimator ImageMomentsCalculator ImagePCAShapeModelEstimator ImageRandomConstIteratorWithIndex ImageRandomNonRepeatingConstIteratorWithIndex, [1] ImageRandomNonRepeatingIteratorWithIndex ImageRegion, [1], [2], [3] Crop IsInside, [1], [2] PadByRadius ImageRegionConstIterator ImageRegionConstIteratorWithIndex ImageRegionExclusionConstIteratorWithIndex

ImageRegionIterator, [1] ImageRegionIteratorWithIndex ImageRegistrationMethod, [1], [2] ImageRegistrationMethodv4, MeanSquaresImageToImageMetricv4 ImageRegistrationMethodv4, RegularStepGradientDescentOptimizerv4 ImageRegistrationMethodv4, TranslationTransform ImageSeriesReader, [1] ImageSeriesWriter ImageSource ImageToHistogramFilter ImageToImageFilter, [1], [2], [3], [4], [5], [6] ImageToListSampleAdaptor ImageToVTKImageFilter, [1], [2], [3] imaginary real ImportImageFilter, [1] Index, [1], [2], [3], [4] index, [1], [2] Indices EuclideanDistanceTo SquaredEuclideanDistanceTo indices inner outer InPlaceImageFilter, [1] input masked InsertElement PointSet instantiate IntensityWindowingImageFilter interpolate position inverse mask matrix InverseFFTImageFilter, [1] invert, [1] InvertIntensityImageFilter, [1] IsFloatingPoint ConceptChecking IsInside ImageRegion, [1], [2] iterate region, [1] iterator itkimage

J

JensenHavrdaCharvatTsallisPointSetToPointSetMetricv4 jet colormap

JetColormapFunction JoinImageFilter

K

KdTreeGenerator kernel, [1] derivative difference image pixel sobel

L

label binary, [1] normal properties regions LabelContourImageFilter labeled color LabelGeometryImageFilter LabelImageGaussianInterpolateImageFunction LabelImageToLabelMapFilter LabelImageToShapeLabelMapFilter, [1] LabelMap LabelMapContourOverlayImageFilter LabelMapMaskImageFilter LabelMapOverlayImageFilter, [1] LabelMapToLabelImageFilter LabelOverlayImageFilter labels remove LabelSelectionLabelMapFilter, [1] LabelShapeKeepNObjectsImageFilter LabelStatisticsImageFilter LabelUniqueLabelMapFilter, [1] landmark LandmarkBasedTransformInitializer laplacian operator

LaplacianImageFilter LaplacianOperator LaplacianRecursiveGaussianImageFilter LaplacianSharpeningImageFilter level property LevelSetContainer, [1] LevelSetDenseImage, [1], [2], [3] LevelSetEquationChanAndVeseExternalTerm, [1] LevelSetEquationChanAndVeseInternalTerm, [1] LevelSetEvolution, [1] LevelSetEvolutionNumberOfIterationsStoppingCriterion, [1] LevelSetIterationUpdateCommand, [1] LevenbergMarquardtOptimizer LightObject line image LinearInterpolateImageFunction, [1], [2], [3] LineConstIterator LineIterator LineSpatialObject LineSpatialObjectPoint ListSample LiThresholdImageFilter local noise location

M

magnitude image MalcolmSparseLevelSetImage manual map scalar mask image inverse non-zero masked correlation input region MaskedFFTNormalizedCorrelationImageFilter MaskedImageToHistogramFilter MaskImageFilter MaskNegatedImageFilter MaskNeighborhoodOperatorImageFilter Math mathematical morphology dilation, [1] erosion, [1] Matrix, [1] matrix inverse MattesMutualInformationImageToImageMetric maurer max, [1] min, [1] maximal region maximum, [1] MaximumImageFilter

mean, [1], [2] MeanImageFilter MeanSquaresImageToImageMetric median image MedianImageFilter, [1] MedianImageFunction MembershipSample MemoryProbe MergeLabelMapFilter MersenneTwisterRandomVariateGenerator, [1], [2] Mesh, [1], [2], [3], [4], [5], [6] GetPoint, [1], [2] MeshFileReader, [1], [2], [3] MeshFileWriter, [1] MetaDataDictionary MetaImageIOFactory min max, [1] minimal region minimum, [1] MinimumImageFilter MinimumMaximumImageCalculator MinMaxCurvatureFlowImageFilter, [1] MirrorPadImageFilter MorphologicalWatershedImageFilter multi-modality registration MultiplyImageFilter, [1] MultiScaleHessianBasedMeasureImageFilter MultiThreaderBase, [1], [2] MutualInformationImageToImageMetric, [1] SetNumberOfSpatialSamples MutualInformationImageToImageMetric, GradientDescentOptimizer

N

neighborhood NeighborhoodIterator, [1] NeighborhoodOperator NeighborhoodOperatorImageFilter NeighborhoodOperatorImageFunction noise local NoiseImageFilter non-zero mask normal label

Normalize CovariantVector normalize NormalizedCorrelationImageFilter, [1], [2] NormalizeImageFilter NormalizeToConstantImageFilter NormalQuadEdgeMeshFilter SetWeight not binary NthElementImageAdaptor, [1] NumericSeriesFileNames, [1] NumericTraits, [1]

O

Object object function ObjectByObjectLabelMapFilter, [1] ObjectFactoryBase Offset oil painting OpenCVImageBridge operation, [1] custom

operator laplacian operator * CovariantVector Vector OR OrImageFilter OtsuMultipleThresholdsImageFilter OtsuThresholdImageFilter outer inner

P

pad image PadByRadius ImageRegion painting oil ParameterizationQuadEdgeMeshFilter PasteImageFilter, [1] PermuteAxesImageFilter pi piece-wise curve pipeline PipelineMonitorImageFilter pixel constant, [1] kernel random pixels corresponding, [1] PNGImageIOFactory Point, [1] EuclideanDistanceTo, [1], [2] SquaredEuclideanDistanceTo, [1]

points edges PointSet, [1], [2], [3], [4] GetPoints InsertElement PolyLineParametricPath position interpolate preserve edges ProcessObject progress properties label property binary geometric level threshold, [1] prune image

Q

QuadEdge GetLnext GetOnext QuadEdgeMesh, [1], [2], [3], [4], [5] AddFaceTriangle AddPoint

QuadEdgeMeshBoundaryEdgesMeshFunction QuadEdgeMeshPoint CastFrom QuadEdgeMeshPolygonCell GetEdgeRingEntry

R

random image, [1] pixel select RandomImageSource range clamp read transform real imaginary RectangularImageNeighborhoodShape RecursiveGaussianImageFilter RecursiveMultiResolutionPyramidImageFilter region, [1] crop, [1] filter geometric image iterate, [1] masked maximal minimal specific RegionalMaximaImageFilter

RegionalMinimaImageFilter RegionGrowImageFilter RegionOfInterestImageFilter regions binary color connect label statistics register transform registration multi-modality RegistrationParameterScalesFromPhysicalShift RegularStepGradientDescentOptimizer, NormalizeImageFilter RelabelComponentImageFilter remove labels resample DICOM ResampleImageFilter, [1], [2], [3], [4] RescaleIntensityImageFilter, [1], [2], [3], [4] RGB, [1] RGBAPixel RGBPixel, [1], [2] RGBToLuminanceImageFilter

S

SampleToHistogramFilter scalar image map ScalarChanAndVeseDenseLevelSetImageFilter ScalarChanAndVeseLevelSetFunction, [1], [2] ScalarChanAndVeseSparseLevelSetImageFilter, [1] ScalarConnectedComponentImageFilter ScalarImageKmeansImageFilter, [1] ScalarImageToTextureFeaturesFilter ScalarToRGBColormapImageFilter, [1] ScaleTransform, [1], [2] segment tube, [1] vessel, [1] segmented image select random SetNumberOfSpatialSamples MutualInformationImageToImageMetric SetPixel Image SetRadius BinaryBallStructuringElement, [1] SetRequestedRegion Image SetWeight NormalQuadEdgeMeshFilter ShapedImageNeighborhoodRange ShapedNeighborhoodIterator, [1] ShapeLabelMap ShapeOpeningLabelMapFilter ShiSparseLevelSetImage ShrinkImageFilter SigmoidImageFilter, [1] signed image

SignedDanielssonDistanceMapImageFilter SignedMaurerDistanceMapImageFilter SimpleContourExtractorImageFilter SimpleFilterWatcher SimplexMeshVolumeCalculator single MergeLabelMapFilter SinImageFilter sinlge: distance-map, [1] sinlge: instance SinRegularizedHeavisideStepFunction, [1] Size, [1], [2], [3] smooth, [1], [2], [3], [4], [5], [6], [7], [8] image SmoothingRecursiveGaussianImageFilter snakes sobel kernel SobelEdgeDetectionImageFilter SobelOperator SpatialObjectToImageFilter specific region spectral density SquaredDifferenceImageFilter SquaredEuclideanDistanceTo Indices Point, [1] SquareImageFilter statistics regions StatisticsImageFilter stream StreamingImageFilter structure data structuring elements SubtractImageFilter, [1]

T

ThinPlateSplineKernelTransform thread ThreadedIndexedContainerPartitioner threshold property, [1] ThresholdImageFilter TIFFImageIO tile, [1] TileImageFilter, [1], [2], [3] TimeProbe timer timing Transform, [1] clone, [1] copy, [1]

transform factory file read register TransformFactory TransformFileReader, [1] TransformMeshFilter TranslationTransform, [1], [2], [3] transparency TriangleMeshToBinaryImageFilter tube segment, [1] type convert

U

UnaryFunctorImageFilter

Upsampling

V

ValuedRegionalMaximaImageFilter ValuedRegionalMinimaImageFilter VariableLengthVector variance Vector, [1], [2] operator * vector image, [1], [2], [3] VectorContainer VectorCurvatureAnisotropicDiffusionImageFilter VectorGradientAnisotropicDiffusionImageFilter VectorImage, [1], [2] cast VectorImageToImageAdaptor VectorImageToImageMetricTraitsv4

VectorIndexSelectionCastImageFilter, [1], [2] VectorMagnitudeImageFilter, [1] VectorRescaleIntensityImageFilter vessel segment, [1] volume area VoronoiDiagram2D VoronoiDiagram2DGenerator VotingBinaryIterativeHoleFillingImageFilter VTKImageToImageFilter, [1], [2] VTKPolyDataReader, [1] VTKPolyDataWriter VTKVisualize2DLevelSetAsElevationMap, [1] vtkVisualize2DSparseLevelSetLayers, [1], [2] VTKVisualizeImageLevelSetIsoValues, [1]

W

warning file WarpImageFilter watershed WatershedImageFilter WhitakerSparseLevelSetImage

WindowedSincInterpolateImageFunction without duplication WrapPadImageFilter, [1] wrapping write access, [1], [2], [3], [4], [5]

X

XorImageFilter

Z

ZeroCrossingBasedEdgeDetectionImageFilter

ZeroCrossingImageFilter